>>> Building on sparc64-2c under math/py-netcdf4,python3 BDEPENDS = [lang/python/3;devel/py-build,python3;devel/py-setuptools,python3;math/hdf5;devel/py-setuptools_scm,python3;devel/py-installer,python3;lang/cython,python3;devel/py-wheel,python3;math/netcdf;archivers/blosc;archivers/libzip;math/py-numpy,python3;math/py-oldest-supported-numpy,python3;archivers/snappy] DIST = [math/py-netcdf4,python3:netcdf4-1.7.2.tar.gz] FULLPKGNAME = py3-netcdf4-1.7.2 RDEPENDS = [math/hdf5;lang/cython,python3;math/py-cftime,python3;math/py-numpy,python3;lang/python/3;devel/py-certifi,python3] (Junk lock obtained for sparc64-2c at 1732387834.37) >>> Running depends in math/py-netcdf4,python3 at 1732387834.47 last junk was in astro/wmglobe /usr/sbin/pkg_add -aI -Drepair blosc-1.21.6 hdf5-1.14.4.3 libzip-1.8.0p0 netcdf-4.9.2p4 py3-build-1.2.2.post1 py3-cython-3.0.10v0 py3-installer-0.7.0p0 py3-numpy-1.26.4p0 py3-oldest-supported-numpy-2022.8.16p1 py3-setuptools-69.5.1v0 py3-setuptools_scm-8.0.4p1 py3-wheel-0.45.0 python-3.11.10p1 snappy-1.1.10p1 was: /usr/sbin/pkg_add -aI -Drepair blosc-1.21.6 hdf5-1.14.4.3 libzip-1.8.0p0 netcdf-4.9.2p4 py3-build-1.2.2.post1 py3-cython-3.0.10v0 py3-installer-0.7.0p0 py3-numpy-1.26.4p0 py3-oldest-supported-numpy-2022.8.16p1 py3-setuptools-69.5.1v0 py3-setuptools_scm-8.0.4p1 py3-wheel-0.45.0 python-3.11.10p1 snappy-1.1.10p1 /usr/sbin/pkg_add -aI -Drepair blosc-1.21.6 hdf5-1.14.4.3 libzip-1.8.0p0 netcdf-4.9.2p4 py3-build-1.2.2.post1 py3-cython-3.0.10v0 py3-installer-0.7.0p0 py3-numpy-1.26.4p0 py3-oldest-supported-numpy-2022.8.16p1 py3-setuptools-69.5.1v0 py3-setuptools_scm-8.0.4p1 py3-wheel-0.45.0 python-3.11.10p1 snappy-1.1.10p1 >>> Running show-prepare-results in math/py-netcdf4,python3 at 1732387909.95 ===> math/py-netcdf4,python3 ===> Building from scratch py3-netcdf4-1.7.2 ===> py3-netcdf4-1.7.2 depends on: blosc-* -> blosc-1.21.6 ===> py3-netcdf4-1.7.2 depends on: libzip-* -> libzip-1.8.0p0 ===> py3-netcdf4-1.7.2 depends on: snappy-* -> snappy-1.1.10p1 ===> py3-netcdf4-1.7.2 depends on: py3-cython-* -> py3-cython-3.0.10v0 ===> py3-netcdf4-1.7.2 depends on: hdf5-* -> hdf5-1.14.4.3 ===> py3-netcdf4-1.7.2 depends on: netcdf-* -> netcdf-4.9.2p4 ===> py3-netcdf4-1.7.2 depends on: py3-oldest-supported-numpy-* -> py3-oldest-supported-numpy-2022.8.16p1 ===> py3-netcdf4-1.7.2 depends on: py3-numpy-* -> py3-numpy-1.26.4p0 ===> py3-netcdf4-1.7.2 depends on: python->=3.11,<3.12 -> python-3.11.10p1 ===> py3-netcdf4-1.7.2 depends on: py3-build-* -> py3-build-1.2.2.post1 ===> py3-netcdf4-1.7.2 depends on: py3-installer-* -> py3-installer-0.7.0p0 ===> py3-netcdf4-1.7.2 depends on: py3-setuptools-* -> py3-setuptools-69.5.1v0 ===> py3-netcdf4-1.7.2 depends on: py3-wheel-* -> py3-wheel-0.45.0 ===> py3-netcdf4-1.7.2 depends on: py3-setuptools_scm-* -> py3-setuptools_scm-8.0.4p1 ===> Verifying specs: netcdf ===> found netcdf.10.0 blosc-1.21.6 hdf5-1.14.4.3 libzip-1.8.0p0 netcdf-4.9.2p4 py3-build-1.2.2.post1 py3-cython-3.0.10v0 py3-installer-0.7.0p0 py3-numpy-1.26.4p0 py3-oldest-supported-numpy-2022.8.16p1 py3-setuptools-69.5.1v0 py3-setuptools_scm-8.0.4p1 py3-wheel-0.45.0 python-3.11.10p1 snappy-1.1.10p1 (Junk lock released for sparc64-2c at 1732387929.87) Woken up sysutils/grive2 distfiles size=835064 >>> Running patch in math/py-netcdf4,python3 at 1732387930.03 ===> math/py-netcdf4,python3 ===> Checking files for py3-netcdf4-1.7.2 `/usr/ports/distfiles/netcdf4-1.7.2.tar.gz' is up to date. >> (SHA256) all files: OK ===> Extracting for py3-netcdf4-1.7.2 ===> Patching for py3-netcdf4-1.7.2 ===> Applying OpenBSD patch patch-pyproject_toml Hmm... Looks like a unified diff to me... The text leading up to this was: -------------------------- |Index: pyproject.toml |--- pyproject.toml.orig |+++ pyproject.toml -------------------------- Patching file pyproject.toml using Plan A... Hunk #1 succeeded at 2. done ===> Compiler link: cc -> /usr/bin/cc ===> Compiler link: c++ -> /usr/bin/c++ >>> Running configure in math/py-netcdf4,python3 at 1732387932.68 ===> math/py-netcdf4,python3 ===> Generating configure for py3-netcdf4-1.7.2 ===> Configuring for py3-netcdf4-1.7.2 >>> Running build in math/py-netcdf4,python3 at 1732387934.29 ===> math/py-netcdf4,python3 ===> Building for py3-netcdf4-1.7.2 * Getting build dependencies for wheel... -L/usr/local/lib -lnetcdf Package hdf5 was not found in the pkg-config search path reading from setup.cfg... using nc-config... checking /usr/local/include... HDF5 library version: 1.14.4-3 headers found in /usr/local/include using netcdf library version b'4.9.2' using Cython to compile netCDF4.pyx... netcdf lib does not have parallel functions NETCDF_PLUGIN_DIR not set, no netcdf compression plugins installed running egg_info writing src/netCDF4.egg-info/PKG-INFO writing dependency_links to src/netCDF4.egg-info/dependency_links.txt writing entry points to src/netCDF4.egg-info/entry_points.txt writing requirements to src/netCDF4.egg-info/requires.txt writing top-level names to src/netCDF4.egg-info/top_level.txt reading manifest file 'src/netCDF4.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' warning: no previously-included files found matching 'examples/data' warning: no previously-included files found matching 'src/netCDF4/_netCDF4.c' adding license file 'LICENSE' writing manifest file 'src/netCDF4.egg-info/SOURCES.txt' * Building wheel... -L/usr/local/lib -lnetcdf Package hdf5 was not found in the pkg-config search path reading from setup.cfg... using nc-config... checking /usr/local/include... HDF5 library version: 1.14.4-3 headers found in /usr/local/include using netcdf library version b'4.9.2' using Cython to compile netCDF4.pyx... netcdf lib does not have parallel functions NETCDF_PLUGIN_DIR not set, no netcdf compression plugins installed running bdist_wheel running build running build_py creating build creating build/lib.openbsd-7.6-sparc64-cpython-311 creating build/lib.openbsd-7.6-sparc64-cpython-311/netCDF4 copying src/netCDF4/__init__.py -> build/lib.openbsd-7.6-sparc64-cpython-311/netCDF4 copying src/netCDF4/utils.py -> build/lib.openbsd-7.6-sparc64-cpython-311/netCDF4 running egg_info writing src/netCDF4.egg-info/PKG-INFO writing dependency_links to src/netCDF4.egg-info/dependency_links.txt writing entry points to src/netCDF4.egg-info/entry_points.txt writing requirements to src/netCDF4.egg-info/requires.txt writing top-level names to src/netCDF4.egg-info/top_level.txt reading manifest file 'src/netCDF4.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' warning: no previously-included files found matching 'examples/data' warning: no previously-included files found matching 'src/netCDF4/_netCDF4.c' adding license file 'LICENSE' writing manifest file 'src/netCDF4.egg-info/SOURCES.txt' copying src/netCDF4/__init__.pyi -> build/lib.openbsd-7.6-sparc64-cpython-311/netCDF4 copying src/netCDF4/_netCDF4.pyi -> build/lib.openbsd-7.6-sparc64-cpython-311/netCDF4 copying src/netCDF4/_netCDF4.pyx -> build/lib.openbsd-7.6-sparc64-cpython-311/netCDF4 copying src/netCDF4/py.typed -> build/lib.openbsd-7.6-sparc64-cpython-311/netCDF4 creating build/lib.openbsd-7.6-sparc64-cpython-311/netCDF4/plugins copying src/netCDF4/plugins/empty.txt -> build/lib.openbsd-7.6-sparc64-cpython-311/netCDF4/plugins running build_ext Compiling src/netCDF4/_netCDF4.pyx because it changed. [1/1] Cythonizing src/netCDF4/_netCDF4.pyx building 'netCDF4._netCDF4' extension creating build/temp.openbsd-7.6-sparc64-cpython-311 creating build/temp.openbsd-7.6-sparc64-cpython-311/external creating build/temp.openbsd-7.6-sparc64-cpython-311/external/nc_complex creating build/temp.openbsd-7.6-sparc64-cpython-311/external/nc_complex/src creating build/temp.openbsd-7.6-sparc64-cpython-311/src creating build/temp.openbsd-7.6-sparc64-cpython-311/src/netCDF4 cc -DNDEBUG -O2 -pipe -fPIC -O2 -pipe -O2 -pipe -O2 -pipe -fPIC -DNPY_NO_DEPRECATED_API=NPY_1_7_API_VERSION -DNC_COMPLEX_NO_EXPORT=1 -I/usr/local/include -I/usr/local/include -I/usr/local/lib/python3.11/site-packages/numpy/core/include -Iinclude -Iexternal/nc_complex/include -Iexternal/nc_complex/include/generated_fallbacks -I/usr/local/include/python3.11 -c external/nc_complex/src/nc_complex.c -o build/temp.openbsd-7.6-sparc64-cpython-311/external/nc_complex/src/nc_complex.o cc -DNDEBUG -O2 -pipe -fPIC -O2 -pipe -O2 -pipe -O2 -pipe -fPIC -DNPY_NO_DEPRECATED_API=NPY_1_7_API_VERSION -DNC_COMPLEX_NO_EXPORT=1 -I/usr/local/include -I/usr/local/include -I/usr/local/lib/python3.11/site-packages/numpy/core/include -Iinclude -Iexternal/nc_complex/include -Iexternal/nc_complex/include/generated_fallbacks -I/usr/local/include/python3.11 -c src/netCDF4/_netCDF4.c -o build/temp.openbsd-7.6-sparc64-cpython-311/src/netCDF4/_netCDF4.o In file included from /usr/local/include/python3.11/unicodeobject.h:1042, from /usr/local/include/python3.11/Python.h:51, from src/netCDF4/_netCDF4.c:67: /usr/local/include/python3.11/cpython/unicodeobject.h: In function 'PyUnicode_GET_SIZE': /usr/local/include/python3.11/cpython/unicodeobject.h:657: warning: 'PyUnicode_AsUnicode' is deprecated (declared at /usr/local/include/python3.11/cpython/unicodeobject.h:611) /usr/local/include/python3.11/cpython/unicodeobject.h:660: warning: 'PyUnicode_WSTR_LENGTH' is deprecated (declared at /usr/local/include/python3.11/cpython/unicodeobject.h:634) /usr/local/include/python3.11/cpython/unicodeobject.h: In function 'PyUnicode_GET_DATA_SIZE': /usr/local/include/python3.11/cpython/unicodeobject.h:672: warning: 'PyUnicode_GET_SIZE' is deprecated (declared at /usr/local/include/python3.11/cpython/unicodeobject.h:653) /usr/local/include/python3.11/cpython/unicodeobject.h: In function 'PyUnicode_AS_UNICODE': /usr/local/include/python3.11/cpython/unicodeobject.h:694: warning: 'PyUnicode_AsUnicode' is deprecated (declared at /usr/local/include/python3.11/cpython/unicodeobject.h:611) /usr/local/include/python3.11/cpython/unicodeobject.h: In function 'PyUnicode_AS_DATA': /usr/local/include/python3.11/cpython/unicodeobject.h:706: warning: 'PyUnicode_AS_UNICODE' is deprecated (declared at /usr/local/include/python3.11/cpython/unicodeobject.h:686) src/netCDF4/_netCDF4.c: In function '__pyx_pf_7netCDF4_8_netCDF4_7_MemBuf_4__dealloc__': src/netCDF4/_netCDF4.c:13228: warning: passing argument 1 of 'free' discards qualifiers from pointer target type cc -shared -fPIC -L/usr/local/lib/ -O2 -pipe build/temp.openbsd-7.6-sparc64-cpython-311/external/nc_complex/src/nc_complex.o build/temp.openbsd-7.6-sparc64-cpython-311/src/netCDF4/_netCDF4.o -L/usr/local/lib -L/usr/local/lib -Wl,--enable-new-dtags,-rpath,/usr/local/lib -lnetcdf -o build/lib.openbsd-7.6-sparc64-cpython-311/netCDF4/_netCDF4.cpython-311.so build/temp.openbsd-7.6-sparc64-cpython-311/src/netCDF4/_netCDF4.o: In function `pfnc_inq_vardimid': _netCDF4.c:(.text+0x2d00): multiple definition of `pfnc_inq_vardimid' build/temp.openbsd-7.6-sparc64-cpython-311/external/nc_complex/src/nc_complex.o:nc_complex.c:(.text+0x8e0): first defined here build/temp.openbsd-7.6-sparc64-cpython-311/src/netCDF4/_netCDF4.o: In function `pfnc_inq_varndims': _netCDF4.c:(.text+0x2d40): multiple definition of `pfnc_inq_varndims' build/temp.openbsd-7.6-sparc64-cpython-311/external/nc_complex/src/nc_complex.o:nc_complex.c:(.text+0x920): first defined here collect2: ld returned 1 exit status error: command '/usr/obj/ports/py-netcdf4-1.7.2-python3/bin/cc' failed with exit code 1 ERROR Backend subprocess exited when trying to invoke build_wheel *** Error 1 in math/py-netcdf4 (/usr/ports/lang/python/python.port.mk:355 'do-build': @:; cd /usr/obj/ports/py-netcdf4-1.7.2-python3/netcdf...) *** Error 2 in math/py-netcdf4 (/usr/ports/infrastructure/mk/bsd.port.mk:3065 '/usr/obj/ports/py-netcdf4-1.7.2-python3/.build_done': @cd /us...) *** Error 2 in math/py-netcdf4 (/usr/ports/infrastructure/mk/bsd.port.mk:2712 'build': @lock=py3-netcdf4-1.7.2; export _LOCKS_HELD=" py3-ne...) ===> Exiting math/py-netcdf4,python3 with an error *** Error 1 in /usr/ports (infrastructure/mk/bsd.port.subdir.mk:144 'build': @: ${echo_msg:=echo}; : ${target:=build}; for i in ; do eval...) >>> Ended at 1732389534.98 max_stuck=1481.80/depends=75.47/show-prepare-results=20.03/patch=2.69/configure=1.62/build=1600.77 Error: job failed with 512 on sparc64-2c at 1732389535